Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015793024.1_cds_XP_016515547.1_2715
CDS Infomation

[gene=LOC107832234] [db_xref=GeneID:107832234] [protein=armadillo repeat-containing protein 8 isoform X2] [protein_id=XP_016515547.1] [location=join(9049..9444,9974..10690,12088..12183,12267..12350,13380..13614,13702..13862,14933..15205,15294..15350)] [gbkey=CDS]
Sequence

ATGCCGGCTTCAGCATCATCGGCGCCGCCGCCTCCGACTCACAGCCGTCGCGAGGATCTA
ATCGGAAAACTGAGCTCTTCCTCCACCGATACAAAGCTCAAAGCCCTTCGCGACCTCAAA
AATCAAATCATCGGTAACCGTACGAAGAAGCTTTGTTTCCTCAAACTCGGCGCCGTTCCT
TTAATTACCTCTATCCTCTCTTCCTCCTCTTCCTCCGCCGGCACGGCTGGTTCTTCATGT
GCCGATGATGACGTGGAACTCAACGATTCGCTTATTATTCAATCGGCTGCTGCTATCGGT
AGCTTTGCGTGTGGCTTTGATGACGGCGTTAAAGCTGTTTTAGATGCCGGTGCTTTTCCT
CTTCTTCTTCGCCTTATTTCTTATCCTAATGATAAGGTAGTGGATGCTGCTGCTCGTTCC
CTTAAGTTTATTTATCAGTCAAAGTTAGCCCCAAGGTATGATTTTCTGCAGGGGAATAAT
ATGACATTTATCTGGTCGCTATTGAATAGTGAAAATGAGAATGTGACTGGACTTGGTGCA
AGTATCATTACACATTCTTGCCAGACAAGTTTTGAGCAGAAGGCATTAAGCGATTCTGGG
GTTTTAAAGAAACTCACATACATGCTTGGAGGGTCTGTAACTCAAACAGATGCTAGTCTA
GAGTCTGTTGCCACTATCCTTAAGGAAAATCCTGATGTCGTTTCAAAGTTCACGGAACCT
GAAAATGGAGGAGCATTGGAGACTATTACTGAATTGACCAAGGATAAAAGTGCCCGGACA
AGACTGCTTGCTTGCATATGCTTGATTGTCATAAAGAACTCTGCTCCTTCTTGCCTTCAA
AATTTACGAATCAAAACAAAATTGATATTAATACTACTTGAGCTTCTTGAGGATGATCAA
GTTGGAGCCGAAGCTCCTTTTGCCTTGTCTAGTTTAATTGCAGAAAGGGAGGATTTGCAA
TTGTTAGCATTCGAGGCAAATGTTATTGATAAGCTTGTCAACCACCTGCGAAGAGGTCCA
ATACAGTCGAGACGTTTAGAGGGTATACTTATTGCATTGGCTAACATGTGCTCCAGACTG
GAACGGTGCAGGGATCGGCTTCTGTCATTAGAGGCTATGAAGCTTGTAGGTGATGCCCTG
AGTCACGACAGTGGTGAAGTGCGTGCTGCAGCATGTATATGTTTGAAAAATGTTTCTCGC
TCAGTCAAGAATCTTAGCACAGGTCTATTTATGAATGAAAGCTTTGTTGTTCCCTTGGTT
CGGCTTTTAGTTGATGATTTGACCTTTGTCCAGGTTTCTGCCCTTGATGCCATCAGCAAC
ATAGCGATTGATTTTTTGGCACATAAGACAATGTTTATGCAGTGTGGAGGTGTGAAGCAG
CTTGTTCAGCTTTCGAAGTCAATGGATTCAACTATTAGGGTAAAAGCCGTGTGTGCTTTA
AGGAACCTGACATTCCTTGTGAACAACAAGTGTAAAGAGGAAATTCTATCAGAGCTCACA
CAGTTGACTCTGAGAAGCCTGATCTGTGATCCTGAGGCTTCTGTTCAAGAGCAAGCTCTA
GCTTTGGTTCGTAATCTTGTTGATGGGCCTCTAGATTCTATCCAGCACATCTTTGCTGAG
GACGCTCTTCTGCTGCATGCTGTGGGACAGCAACTGCAGAGTGCTTCAAAAGCTCAAGTC
CTCATTCAGGGTATGTACGTCTTTACAAATGTGGCATCTGGAAATGAGGTGCACAAGGAA
GCTGTTATGCAAGAGCTCTTTCCACCGTTAGCTAATGATTCTGAATCAATTATGTTCAAG
TTTTTACATAGTGATGATAGCCGGTTACGTACAGCTGCAGTTTGGACTCTAGTGAACCTT
ACTTCTCCAAGCAGTTCTGGTGCATCTGGCTGGGTGATGAAACTACGGAATGCCGGCATA
GTTTCCCAGTTGAAAAATATGGTCAATGATCCTTGCCTTGATCTTAGAGCGAGGACAGCT
CTAGGGCAATCAATGACTTCTGGTGATGGTTCTACATGA

Peptide Sequence

PEP ID

XP_016515547.1
PEP Infomation

PREDICTED: armadillo repeat-containing protein 8 isoform X2 [Nicotiana tabacum]
Sequence

MPASASSAPPPPTHSRREDLIGKLSSSSTDTKLKALRDLKNQIIGNRTKKLCFLKLGAVP
LITSILSSSSSSAGTAGSSCADDDVELNDSLIIQSAAAIGSFACGFDDGVKAVLDAGAFP
LLLRLISYPNDKVVDAAARSLKFIYQSKLAPRYDFLQGNNMTFIWSLLNSENENVTGLGA
SIITHSCQTSFEQKALSDSGVLKKLTYMLGGSVTQTDASLESVATILKENPDVVSKFTEP
ENGGALETITELTKDKSARTRLLACICLIVIKNSAPSCLQNLRIKTKLILILLELLEDDQ
VGAEAPFALSSLIAEREDLQLLAFEANVIDKLVNHLRRGPIQSRRLEGILIALANMCSRL
ERCRDRLLSLEAMKLVGDALSHDSGEVRAAACICLKNVSRSVKNLSTGLFMNESFVVPLV
RLLVDDLTFVQVSALDAISNIAIDFLAHKTMFMQCGGVKQLVQLSKSMDSTIRVKAVCAL
RNLTFLVNNKCKEEILSELTQLTLRSLICDPEASVQEQALALVRNLVDGPLDSIQHIFAE
DALLLHAVGQQLQSASKAQVLIQGMYVFTNVASGNEVHKEAVMQELFPPLANDSESIMFK
FLHSDDSRLRTAAVWTLVNLTSPSSSGASGWVMKLRNAGIVSQLKNMVNDPCLDLRARTA
LGQSMTSGDGST

Transcript Sequence

Gene sequence data has not been registered.